Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
BckdkO55028 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.13□□□□□ -0.47
BckdkO55028 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BckdkO55028 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BckdkO55028 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
BckdkO55028 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
BckdkO55028 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
BckdkO55028 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
BckdkO55028 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
BckdkO55028 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.12□□□□□ -0.47
BckdkO55028 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.12□□□□□ -0.47
BckdkO55028 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.12□□□□□ -0.47
BckdkO55028 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.12□□□□□ -0.47
BckdkO55028 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
BckdkO55028 Gm8652-201ENSMUST00000181363 964 ntBASIC12.12□□□□□ -0.47
BckdkO55028 Gm45784-201ENSMUST00000188360 142 ntBASIC12.12□□□□□ -0.47
BckdkO55028 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.12□□□□□ -0.47
BckdkO55028 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
BckdkO55028 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.12□□□□□ -0.47
BckdkO55028 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.12□□□□□ -0.47
BckdkO55028 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.12□□□□□ -0.47
BckdkO55028 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.12□□□□□ -0.47
BckdkO55028 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
BckdkO55028 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
BckdkO55028 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.12□□□□□ -0.47
BckdkO55028 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BckdkO55028 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.11□□□□□ -0.47
BckdkO55028 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.11□□□□□ -0.47
BckdkO55028 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
BckdkO55028 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.11□□□□□ -0.47
BckdkO55028 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.11□□□□□ -0.47
BckdkO55028 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.11□□□□□ -0.47
BckdkO55028 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.11□□□□□ -0.47
BckdkO55028 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
BckdkO55028 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.11□□□□□ -0.47
BckdkO55028 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.11□□□□□ -0.47
BckdkO55028 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.11□□□□□ -0.47
BckdkO55028 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
BckdkO55028 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BckdkO55028 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.11□□□□□ -0.47
BckdkO55028 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms