Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.58□□□□□ -0.24
Ebf3O08791 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ebf3O08791 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.58□□□□□ -0.24
Ebf3O08791 Gm43758-201ENSMUST00000199500 367 ntBASIC13.58□□□□□ -0.24
Ebf3O08791 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Gm6334-201ENSMUST00000207083 228 ntBASIC13.58□□□□□ -0.24
Ebf3O08791 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.58□□□□□ -0.24
Ebf3O08791 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.58□□□□□ -0.24
Ebf3O08791 Cts7-204ENSMUST00000225321 1257 ntBASIC13.58□□□□□ -0.24
Ebf3O08791 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.58□□□□□ -0.24
Ebf3O08791 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ebf3O08791 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.58□□□□□ -0.24
Ebf3O08791 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.58□□□□□ -0.24
Ebf3O08791 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.58□□□□□ -0.24
Ebf3O08791 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ebf3O08791 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.57□□□□□ -0.24
Ebf3O08791 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.57□□□□□ -0.24
Ebf3O08791 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ebf3O08791 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Ebf3O08791 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ebf3O08791 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.57□□□□□ -0.24
Ebf3O08791 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Gm6222-202ENSMUST00000182143 629 ntBASIC13.57□□□□□ -0.24
Ebf3O08791 Gm29396-201ENSMUST00000185659 716 ntBASIC13.57□□□□□ -0.24
Ebf3O08791 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.57□□□□□ -0.24
Ebf3O08791 Gm44069-201ENSMUST00000204898 506 ntBASIC13.57□□□□□ -0.24
Ebf3O08791 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.57□□□□□ -0.24
Ebf3O08791 Gm10608-202ENSMUST00000213924 676 ntBASIC13.57□□□□□ -0.24
Ebf3O08791 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.57□□□□□ -0.24
Ebf3O08791 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ebf3O08791 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ebf3O08791 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ebf3O08791 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ebf3O08791 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.57□□□□□ -0.24
Ebf3O08791 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ebf3O08791 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.57□□□□□ -0.24
Ebf3O08791 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf3O08791 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Ebf3O08791 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.56□□□□□ -0.24
Ebf3O08791 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ebf3O08791 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.56□□□□□ -0.24
Ebf3O08791 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Ebf3O08791 Gm12241-201ENSMUST00000118330 726 ntBASIC13.56□□□□□ -0.24
Ebf3O08791 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.56□□□□□ -0.24
Ebf3O08791 Gm16379-201ENSMUST00000161469 348 ntBASIC13.56□□□□□ -0.24
Ebf3O08791 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.56□□□□□ -0.24
Ebf3O08791 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ebf3O08791 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.56□□□□□ -0.24
Ebf3O08791 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.56□□□□□ -0.24
Ebf3O08791 Gm8762-201ENSMUST00000193486 339 ntBASIC13.56□□□□□ -0.24
Ebf3O08791 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.56□□□□□ -0.24
Ebf3O08791 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.56□□□□□ -0.24
Ebf3O08791 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ebf3O08791 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf3O08791 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.56□□□□□ -0.24
Ebf3O08791 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.56□□□□□ -0.24
Ebf3O08791 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms