Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcf11G3X9Z4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Gm5638-201ENSMUST00000118618 1258 ntBASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Gm43962-201ENSMUST00000203898 190 ntBASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Gm45433-201ENSMUST00000209386 247 ntBASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Gm19208-201ENSMUST00000213861 912 ntBASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Gm6210-201ENSMUST00000204734 1942 ntBASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcf11G3X9Z4 Gm24934-201ENSMUST00000103764 111 ntBASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Gm45342-201ENSMUST00000210903 1363 ntBASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcf11G3X9Z4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcf11G3X9Z4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pcf11G3X9Z4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcf11G3X9Z4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC19.39■□□□□ 0.7
Pcf11G3X9Z4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcf11G3X9Z4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcf11G3X9Z4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcf11G3X9Z4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Pcf11G3X9Z4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Gm27552-201ENSMUST00000183351 62 ntBASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Gm27844-201ENSMUST00000183613 62 ntBASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcf11G3X9Z4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Gm13812-201ENSMUST00000118061 1347 ntBASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Gm13810-201ENSMUST00000118584 1347 ntBASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Gm9996-201ENSMUST00000070359 913 ntBASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcf11G3X9Z4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms