Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Gm12882-201ENSMUST00000121696 517 ntBASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim55G3X8Y1 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Gm5479-201ENSMUST00000160578 435 ntBASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Gm16026-204ENSMUST00000162652 683 ntBASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Gm44719-201ENSMUST00000206404 149 ntBASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim55G3X8Y1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Gm7222-201ENSMUST00000117512 906 ntBASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Gm13036-201ENSMUST00000117799 748 ntBASIC13.37□□□□□ -0.27
Trim55G3X8Y1 Gm14140-201ENSMUST00000119999 995 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms