Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.68■□□□□ 0.1
NpcdF8VQB8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Gm8194-201ENSMUST00000159783 859 ntBASIC15.68■□□□□ 0.1
NpcdF8VQB8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.68■□□□□ 0.1
NpcdF8VQB8 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Gm44551-201ENSMUST00000208804 171 ntBASIC15.68■□□□□ 0.1
NpcdF8VQB8 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Gm32025-201ENSMUST00000217960 307 ntBASIC15.68■□□□□ 0.1
NpcdF8VQB8 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.68■□□□□ 0.1
NpcdF8VQB8 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.68■□□□□ 0.1
NpcdF8VQB8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NpcdF8VQB8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.67■□□□□ 0.1
NpcdF8VQB8 Gm15131-201ENSMUST00000119124 595 ntBASIC15.67■□□□□ 0.1
NpcdF8VQB8 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Gm25700-201ENSMUST00000177693 110 ntBASIC15.67■□□□□ 0.1
NpcdF8VQB8 Gm8856-201ENSMUST00000185254 1144 ntBASIC15.67■□□□□ 0.1
NpcdF8VQB8 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NpcdF8VQB8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.66■□□□□ 0.1
NpcdF8VQB8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Gm9062-201ENSMUST00000117712 727 ntBASIC15.66■□□□□ 0.1
NpcdF8VQB8 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.66■□□□□ 0.1
NpcdF8VQB8 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.66■□□□□ 0.1
NpcdF8VQB8 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC15.66■□□□□ 0.1
NpcdF8VQB8 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 AC122876.1-201ENSMUST00000217619 825 ntBASIC15.66■□□□□ 0.1
NpcdF8VQB8 Spcs1-203ENSMUST00000226374 592 ntBASIC15.66■□□□□ 0.1
NpcdF8VQB8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NpcdF8VQB8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms