Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb9E9Q5G2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Gm18584-201ENSMUST00000203098 964 ntBASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb9E9Q5G2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Gm43118-201ENSMUST00000199149 775 ntBASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb9E9Q5G2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Gm43133-201ENSMUST00000197472 463 ntBASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb9E9Q5G2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms