Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4lE9Q2N0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4lE9Q2N0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4lE9Q2N0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4lE9Q2N0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4lE9Q2N0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4lE9Q2N0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4lE9Q2N0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4lE9Q2N0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.05□□□□□ -0.64
Cpsf4lE9Q2N0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4lE9Q2N0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4lE9Q2N0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4lE9Q2N0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Gm12390-201ENSMUST00000117897 397 ntBASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Gm4271-201ENSMUST00000174444 973 ntBASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4lE9Q2N0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Gm4984-201ENSMUST00000115987 360 ntBASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Gm16479-201ENSMUST00000121706 932 ntBASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Gm29127-201ENSMUST00000188304 517 ntBASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4lE9Q2N0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms