Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Herc1E9PZP8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Herc1E9PZP8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Herc1E9PZP8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Herc1E9PZP8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Herc1E9PZP8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Herc1E9PZP8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Herc1E9PZP8 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Herc1E9PZP8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Herc1E9PZP8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Herc1E9PZP8 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Herc1E9PZP8 Gm43721-201ENSMUST00000199677 2313 ntBASIC7.07□□□□□ -1.28
Herc1E9PZP8 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Herc1E9PZP8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm12499-201ENSMUST00000121961 546 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 AL844586.1-201ENSMUST00000224297 1042 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm9791-201ENSMUST00000060997 447 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm5292-201ENSMUST00000073317 580 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm42689-201ENSMUST00000202403 404 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Olfr1347-205ENSMUST00000220413 964 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 CT009550.1-201ENSMUST00000225750 864 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm44981-201ENSMUST00000205549 1943 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm23582-201ENSMUST00000158530 139 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm26134-201ENSMUST00000178484 110 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm13117-201ENSMUST00000120894 691 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Gm18042-201ENSMUST00000219887 790 ntBASIC7.06□□□□□ -1.28
Herc1E9PZP8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Herc1E9PZP8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC7.05□□□□□ -1.28
Herc1E9PZP8 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC7.05□□□□□ -1.28
Herc1E9PZP8 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Herc1E9PZP8 Gm17192-201ENSMUST00000169031 511 ntBASIC7.05□□□□□ -1.28
Herc1E9PZP8 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC7.05□□□□□ -1.28
Herc1E9PZP8 Gm5267-201ENSMUST00000191574 1045 ntBASIC7.05□□□□□ -1.28
Herc1E9PZP8 Gm37207-201ENSMUST00000194284 296 ntBASIC7.05□□□□□ -1.28
Herc1E9PZP8 AC122350.1-201ENSMUST00000228135 533 ntBASIC7.05□□□□□ -1.28
Herc1E9PZP8 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Herc1E9PZP8 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Herc1E9PZP8 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Herc1E9PZP8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Herc1E9PZP8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Herc1E9PZP8 CT009489.1-201ENSMUST00000227740 1893 ntBASIC7.05□□□□□ -1.28
Herc1E9PZP8 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Herc1E9PZP8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Herc1E9PZP8 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms