Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a3E9PWQ3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm11560-201ENSMUST00000117567 948 ntBASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm5700-201ENSMUST00000191483 989 ntBASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm26448-201ENSMUST00000082446 203 ntBASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm43186-201ENSMUST00000198130 824 ntBASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm22661-201ENSMUST00000104192 132 ntBASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm24279-201ENSMUST00000104236 131 ntBASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.66□□□□□ -0.38
Col6a3E9PWQ3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Gm2965-201ENSMUST00000198365 343 ntBASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Gm10580-201ENSMUST00000097985 396 ntBASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Gm10581-201ENSMUST00000097986 231 ntBASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Gm10582-201ENSMUST00000097987 396 ntBASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Gm10583-201ENSMUST00000097988 396 ntBASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col6a3E9PWQ3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.65□□□□□ -0.39
Col6a3E9PWQ3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Col6a3E9PWQ3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col6a3E9PWQ3 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Gm25053-201ENSMUST00000103982 133 ntBASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Gm25922-201ENSMUST00000104281 130 ntBASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Gm24679-201ENSMUST00000158762 111 ntBASIC12.64□□□□□ -0.39
Col6a3E9PWQ3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms