Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Gm13612-201ENSMUST00000119276 390 ntBASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn6Q9Z262 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.24□□□□□ -0.45
Cldn6Q9Z262 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Gm7287-201ENSMUST00000205267 602 ntBASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn6Q9Z262 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Gm12138-201ENSMUST00000122180 951 ntBASIC12.22□□□□□ -0.45
Cldn6Q9Z262 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Gm6458-201ENSMUST00000211573 635 ntBASIC12.22□□□□□ -0.45
Cldn6Q9Z262 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 125.4 ms