Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Gm13492-201ENSMUST00000119772 665 ntBASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Gm14704-201ENSMUST00000120300 874 ntBASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcb1Q9Z0H3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Gm11222-201ENSMUST00000119005 738 ntBASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Gm21769-201ENSMUST00000211922 111 ntBASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Gm9257-201ENSMUST00000221254 232 ntBASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcb1Q9Z0H3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Smarcb1Q9Z0H3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Gm15370-201ENSMUST00000117158 253 ntBASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Gm12502-201ENSMUST00000120197 444 ntBASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Gm38341-201ENSMUST00000195357 515 ntBASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Gm5904-201ENSMUST00000210286 865 ntBASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Gm45865-201ENSMUST00000211815 945 ntBASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcb1Q9Z0H3 Cts7-204ENSMUST00000225321 1257 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms