Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SrfQ9JM73 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.36□□□□□ -0.43
SrfQ9JM73 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SrfQ9JM73 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.35□□□□□ -0.43
SrfQ9JM73 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.35□□□□□ -0.43
SrfQ9JM73 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.35□□□□□ -0.43
SrfQ9JM73 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SrfQ9JM73 Gm14921-201ENSMUST00000118643 908 ntBASIC12.35□□□□□ -0.43
SrfQ9JM73 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Gm12566-201ENSMUST00000121479 359 ntBASIC12.35□□□□□ -0.43
SrfQ9JM73 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.35□□□□□ -0.43
SrfQ9JM73 Gm8502-201ENSMUST00000185708 901 ntBASIC12.35□□□□□ -0.43
SrfQ9JM73 Gm8510-201ENSMUST00000189202 895 ntBASIC12.35□□□□□ -0.43
SrfQ9JM73 Gm2316-201ENSMUST00000190613 921 ntBASIC12.35□□□□□ -0.43
SrfQ9JM73 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.35□□□□□ -0.43
SrfQ9JM73 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.35□□□□□ -0.43
SrfQ9JM73 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.35□□□□□ -0.43
SrfQ9JM73 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.35□□□□□ -0.43
SrfQ9JM73 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.35□□□□□ -0.43
SrfQ9JM73 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
SrfQ9JM73 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SrfQ9JM73 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SrfQ9JM73 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.34□□□□□ -0.43
SrfQ9JM73 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Gm14659-201ENSMUST00000117667 843 ntBASIC12.34□□□□□ -0.43
SrfQ9JM73 Gm5133-201ENSMUST00000118940 1255 ntBASIC12.34□□□□□ -0.43
SrfQ9JM73 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.34□□□□□ -0.43
SrfQ9JM73 Gm38092-201ENSMUST00000195600 653 ntBASIC12.34□□□□□ -0.43
SrfQ9JM73 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Gm19931-201ENSMUST00000198920 368 ntBASIC12.34□□□□□ -0.43
SrfQ9JM73 Gm44405-201ENSMUST00000198952 126 ntBASIC12.34□□□□□ -0.43
SrfQ9JM73 Gm42997-202ENSMUST00000200321 985 ntBASIC12.34□□□□□ -0.43
SrfQ9JM73 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SrfQ9JM73 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SrfQ9JM73 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
SrfQ9JM73 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SrfQ9JM73 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SrfQ9JM73 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SrfQ9JM73 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
SrfQ9JM73 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SrfQ9JM73 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SrfQ9JM73 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SrfQ9JM73 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SrfQ9JM73 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SrfQ9JM73 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SrfQ9JM73 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SrfQ9JM73 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.33□□□□□ -0.44
SrfQ9JM73 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SrfQ9JM73 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.33□□□□□ -0.44
SrfQ9JM73 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SrfQ9JM73 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SrfQ9JM73 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SrfQ9JM73 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms