Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Gm5616-201ENSMUST00000165252 384 ntBASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Gm8741-201ENSMUST00000174736 384 ntBASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Gm23699-201ENSMUST00000158835 135 ntBASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Gm27552-201ENSMUST00000183351 62 ntBASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Gm27844-201ENSMUST00000183613 62 ntBASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Gm10076-201ENSMUST00000073238 384 ntBASIC14.62□□□□□ -0.07
Cacna1fQ9JIS7 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 AU022133-201ENSMUST00000200601 873 ntBASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Gm18730-201ENSMUST00000218038 343 ntBASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Gm9996-201ENSMUST00000070359 913 ntBASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1fQ9JIS7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Gm14999-201ENSMUST00000121039 624 ntBASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Gm7467-201ENSMUST00000185173 652 ntBASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1fQ9JIS7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms