Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13□□□□□ -0.33
Tubb3Q9ERD7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13□□□□□ -0.33
Tubb3Q9ERD7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Gm21038-201ENSMUST00000222205 1383 ntBASIC13□□□□□ -0.33
Tubb3Q9ERD7 Mir874-201ENSMUST00000104769 76 ntBASIC13□□□□□ -0.33
Tubb3Q9ERD7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Gm6244-201ENSMUST00000178732 841 ntBASIC13□□□□□ -0.33
Tubb3Q9ERD7 Gm27839-201ENSMUST00000184242 106 ntBASIC13□□□□□ -0.33
Tubb3Q9ERD7 Gm44799-201ENSMUST00000207639 1202 ntBASIC13□□□□□ -0.33
Tubb3Q9ERD7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Gm18062-201ENSMUST00000208020 547 ntBASIC13□□□□□ -0.33
Tubb3Q9ERD7 Gm18055-201ENSMUST00000208254 547 ntBASIC13□□□□□ -0.33
Tubb3Q9ERD7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tubb3Q9ERD7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Mir1894-201ENSMUST00000122802 81 ntBASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Gm2495-201ENSMUST00000191160 466 ntBASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tubb3Q9ERD7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Gm15371-201ENSMUST00000117057 784 ntBASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Gm15770-201ENSMUST00000117498 584 ntBASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tubb3Q9ERD7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms