Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Gm10576-201ENSMUST00000191927 825 ntBASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Gm45668-201ENSMUST00000211271 493 ntBASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.1□□□□□ -0.15
Gtf3c6Q9D8P7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gtf3c6Q9D8P7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gtf3c6Q9D8P7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Gtf3c6Q9D8P7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.08□□□□□ -0.15
Gtf3c6Q9D8P7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gtf3c6Q9D8P7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Gtf3c6Q9D8P7 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Gm15429-201ENSMUST00000151268 798 ntBASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Gm5866-201ENSMUST00000177881 973 ntBASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.08□□□□□ -0.16
Gtf3c6Q9D8P7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms