Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Stag1Q9D3E6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.55■□□□□ 0.08
Stag1Q9D3E6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Stag1Q9D3E6 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.55■□□□□ 0.08
Stag1Q9D3E6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.55■□□□□ 0.08
Stag1Q9D3E6 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.55■□□□□ 0.08
Stag1Q9D3E6 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag1Q9D3E6 Matn2-206ENSMUST00000228570 2798 ntBASIC15.55■□□□□ 0.08
Stag1Q9D3E6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag1Q9D3E6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag1Q9D3E6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Stag1Q9D3E6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Stag1Q9D3E6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Stag1Q9D3E6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Stag1Q9D3E6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Gm11964-201ENSMUST00000120982 444 ntBASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Gm17376-201ENSMUST00000166016 84 ntBASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.54■□□□□ 0.08
Stag1Q9D3E6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Stag1Q9D3E6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Gm11222-201ENSMUST00000119005 738 ntBASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Gm20482-202ENSMUST00000174729 825 ntBASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Stag1Q9D3E6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Stag1Q9D3E6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Stag1Q9D3E6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Stag1Q9D3E6 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms