Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Snora78-201ENSMUST00000158630 128 ntBASIC10.92□□□□□ -0.66
Ssbp3Q9D032 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ssbp3Q9D032 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Gm12384-201ENSMUST00000119228 919 ntBASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Gm4271-201ENSMUST00000174444 973 ntBASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Gm45841-201ENSMUST00000207700 164 ntBASIC10.91□□□□□ -0.66
Ssbp3Q9D032 AC154532.1-201ENSMUST00000227860 965 ntBASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ssbp3Q9D032 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Gm13369-201ENSMUST00000119442 987 ntBASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Gm44069-201ENSMUST00000204898 506 ntBASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ssbp3Q9D032 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms