Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Mrpl55Q9CZ83 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Gm7730-201ENSMUST00000212486 454 ntBASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Gm16476-201ENSMUST00000221544 139 ntBASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 AC121804.3-201ENSMUST00000223420 295 ntBASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 AC238811.1-201ENSMUST00000225302 441 ntBASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 AC149588.3-201ENSMUST00000227515 150 ntBASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Mrpl55Q9CZ83 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Gm3365-201ENSMUST00000216296 1480 ntBASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Syt7-205ENSMUST00000224135 1557 ntBASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Gm14719-201ENSMUST00000121891 340 ntBASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Mrpl55Q9CZ83 Gm16215-201ENSMUST00000161990 637 ntBASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms