Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Gm24420-201ENSMUST00000176676 59 ntBASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Gm45331-201ENSMUST00000209868 554 ntBASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.64□□□□□ -0.07
Smc1aQ9CU62 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smc1aQ9CU62 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Gm8652-201ENSMUST00000181363 964 ntBASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Gm8927-201ENSMUST00000181978 981 ntBASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Gm27847-201ENSMUST00000183711 107 ntBASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Gm27375-201ENSMUST00000183799 107 ntBASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Gm27772-201ENSMUST00000184900 187 ntBASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Gm3222-201ENSMUST00000071282 990 ntBASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smc1aQ9CU62 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Gm15376-201ENSMUST00000122258 783 ntBASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.62□□□□□ -0.07
Smc1aQ9CU62 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Gm8062-201ENSMUST00000139696 444 ntBASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Gm26464-201ENSMUST00000157094 305 ntBASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Gm17420-201ENSMUST00000164753 153 ntBASIC14.62□□□□□ -0.07
Smc1aQ9CU62 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smc1aQ9CU62 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms