Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldnd1Q9CQX5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldnd1Q9CQX5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldnd1Q9CQX5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cldnd1Q9CQX5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldnd1Q9CQX5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.31□□□□□ -0.28
Cldnd1Q9CQX5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cldnd1Q9CQX5 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldnd1Q9CQX5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.31□□□□□ -0.28
Cldnd1Q9CQX5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Gm44126-201ENSMUST00000204831 514 ntBASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Gm17812-201ENSMUST00000204935 318 ntBASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cldnd1Q9CQX5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Gm15131-201ENSMUST00000119124 595 ntBASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Gm7848-201ENSMUST00000210739 718 ntBASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cldnd1Q9CQX5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.28□□□□□ -0.28
Cldnd1Q9CQX5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms