Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 Gm3890-201ENSMUST00000182416 207 ntBASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sf3b1Q99NB9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Gm43758-201ENSMUST00000199500 367 ntBASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Gm10608-202ENSMUST00000213924 676 ntBASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sf3b1Q99NB9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Gm37489-201ENSMUST00000191883 159 ntBASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Gm38341-201ENSMUST00000195357 515 ntBASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Gm18584-201ENSMUST00000203098 964 ntBASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Gm5781-201ENSMUST00000219792 443 ntBASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sf3b1Q99NB9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b1Q99NB9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b1Q99NB9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b1Q99NB9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.84□□□□□ -0.19
Sf3b1Q99NB9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b1Q99NB9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b1Q99NB9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b1Q99NB9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b1Q99NB9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.84□□□□□ -0.19
Sf3b1Q99NB9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b1Q99NB9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b1Q99NB9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b1Q99NB9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms