Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm42550-201ENSMUST00000201553 960 ntBASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm15823-201ENSMUST00000064305 670 ntBASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Gm12341-201ENSMUST00000119724 503 ntBASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Gm12091-201ENSMUST00000146791 830 ntBASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Mir6392-201ENSMUST00000184924 108 ntBASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Gm18018-201ENSMUST00000198273 408 ntBASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Paupar-201ENSMUST00000194826 3482 ntBASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp1b1Q99LU0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Gm29608-201ENSMUST00000190444 463 ntBASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Gm18624-201ENSMUST00000220966 658 ntBASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp1b1Q99LU0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms