Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.79□□□□□ -0.2
Usp11Q99K46 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Usp11Q99K46 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.79□□□□□ -0.2
Usp11Q99K46 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.79□□□□□ -0.2
Usp11Q99K46 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Usp11Q99K46 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Usp11Q99K46 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Usp11Q99K46 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Usp11Q99K46 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Usp11Q99K46 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.78□□□□□ -0.2
Usp11Q99K46 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.78□□□□□ -0.2
Usp11Q99K46 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.78□□□□□ -0.2
Usp11Q99K46 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp11Q99K46 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp11Q99K46 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp11Q99K46 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Gm6745-201ENSMUST00000199216 526 ntBASIC13.78□□□□□ -0.2
Usp11Q99K46 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Gm9794-201ENSMUST00000202370 423 ntBASIC13.78□□□□□ -0.2
Usp11Q99K46 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.78□□□□□ -0.2
Usp11Q99K46 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Usp11Q99K46 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.78□□□□□ -0.2
Usp11Q99K46 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Usp11Q99K46 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Usp11Q99K46 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Usp11Q99K46 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Usp11Q99K46 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp11Q99K46 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp11Q99K46 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp11Q99K46 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp11Q99K46 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Usp11Q99K46 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Usp11Q99K46 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.77□□□□□ -0.21
Usp11Q99K46 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.77□□□□□ -0.21
Usp11Q99K46 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.77□□□□□ -0.21
Usp11Q99K46 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.77□□□□□ -0.21
Usp11Q99K46 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.77□□□□□ -0.21
Usp11Q99K46 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Usp11Q99K46 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.77□□□□□ -0.21
Usp11Q99K46 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Gm9908-201ENSMUST00000211534 448 ntBASIC13.77□□□□□ -0.21
Usp11Q99K46 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Gm17330-201ENSMUST00000221047 165 ntBASIC13.77□□□□□ -0.21
Usp11Q99K46 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Usp11Q99K46 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Usp11Q99K46 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Usp11Q99K46 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.77□□□□□ -0.21
Usp11Q99K46 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Usp11Q99K46 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp11Q99K46 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp11Q99K46 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Usp11Q99K46 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp11Q99K46 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp11Q99K46 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.76□□□□□ -0.21
Usp11Q99K46 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Usp11Q99K46 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms