Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Gm12428-201ENSMUST00000119844 727 ntBASIC13.18□□□□□ -0.3
Cdk9Q99J95 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Auts2-212ENSMUST00000178555 309 ntBASIC13.18□□□□□ -0.3
Cdk9Q99J95 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.18□□□□□ -0.3
Cdk9Q99J95 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Gm10576-201ENSMUST00000191927 825 ntBASIC13.18□□□□□ -0.3
Cdk9Q99J95 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.18□□□□□ -0.3
Cdk9Q99J95 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.18□□□□□ -0.3
Cdk9Q99J95 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdk9Q99J95 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk9Q99J95 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Cdk9Q99J95 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.17□□□□□ -0.3
Cdk9Q99J95 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Gm24543-201ENSMUST00000103867 82 ntBASIC13.17□□□□□ -0.3
Cdk9Q99J95 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.17□□□□□ -0.3
Cdk9Q99J95 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.17□□□□□ -0.3
Cdk9Q99J95 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdk9Q99J95 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.16□□□□□ -0.3
Cdk9Q99J95 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Gm15770-201ENSMUST00000117498 584 ntBASIC13.16□□□□□ -0.3
Cdk9Q99J95 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Gm15693-201ENSMUST00000120470 637 ntBASIC13.16□□□□□ -0.3
Cdk9Q99J95 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Gm24420-201ENSMUST00000176676 59 ntBASIC13.16□□□□□ -0.3
Cdk9Q99J95 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Gm4804-201ENSMUST00000182234 999 ntBASIC13.16□□□□□ -0.3
Cdk9Q99J95 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.16□□□□□ -0.3
Cdk9Q99J95 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk9Q99J95 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms