Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha3Q91Y16 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Gm24196-201ENSMUST00000179161 110 ntBASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Gm27847-201ENSMUST00000183711 107 ntBASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Gm27375-201ENSMUST00000183799 107 ntBASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha3Q91Y16 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Gm8652-201ENSMUST00000181363 964 ntBASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha3Q91Y16 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms