Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb2Q91Y00 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdhb2Q91Y00 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Gm8805-201ENSMUST00000117848 313 ntBASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Gm14716-201ENSMUST00000120138 718 ntBASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Gm2231-201ENSMUST00000125661 612 ntBASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Gm19931-201ENSMUST00000198920 368 ntBASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb2Q91Y00 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.9□□□□□ -0.19
Pcdhb2Q91Y00 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Pcdhb2Q91Y00 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhb2Q91Y00 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.9□□□□□ -0.19
Pcdhb2Q91Y00 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Matn2-206ENSMUST00000228570 2798 ntBASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Gm10146-201ENSMUST00000072739 309 ntBASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb2Q91Y00 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb2Q91Y00 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb2Q91Y00 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb2Q91Y00 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb2Q91Y00 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb2Q91Y00 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb2Q91Y00 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb2Q91Y00 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb2Q91Y00 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb2Q91Y00 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb2Q91Y00 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms