Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Gm18290-201ENSMUST00000202900 844 ntBASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 AC110816.1-201ENSMUST00000218559 980 ntBASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 AC132881.1-201ENSMUST00000223780 1062 ntBASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb20Q91XZ9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm15678-201ENSMUST00000117573 960 ntBASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Mup-ps10-201ENSMUST00000119626 556 ntBASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm24809-201ENSMUST00000175318 271 ntBASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm38223-201ENSMUST00000194484 695 ntBASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm38341-201ENSMUST00000195357 515 ntBASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Cenpk-202ENSMUST00000070761 1306 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb20Q91XZ9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhb20Q91XZ9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhb20Q91XZ9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhb20Q91XZ9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhb20Q91XZ9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhb20Q91XZ9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb20Q91XZ9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb20Q91XZ9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb20Q91XZ9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb20Q91XZ9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb20Q91XZ9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
Pcdhb20Q91XZ9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb20Q91XZ9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms