Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhga11Q91XY8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Gm15376-201ENSMUST00000122258 783 ntBASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhga11Q91XY8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Gm38223-201ENSMUST00000194484 695 ntBASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Gm19931-201ENSMUST00000198920 368 ntBASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Gm9794-201ENSMUST00000202370 423 ntBASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.67□□□□□ -0.38
Pcdhga11Q91XY8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 131.9 ms