Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Gm23045-201ENSMUST00000175041 96 ntBASIC15.13■□□□□ 0.01
StrcQ8VIM6 Gm44158-201ENSMUST00000203881 505 ntBASIC15.13■□□□□ 0.01
StrcQ8VIM6 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.13■□□□□ 0.01
StrcQ8VIM6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
StrcQ8VIM6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.12■□□□□ 0.01
StrcQ8VIM6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Mir874-201ENSMUST00000104769 76 ntBASIC15.12■□□□□ 0.01
StrcQ8VIM6 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Gm43186-201ENSMUST00000198130 824 ntBASIC15.12■□□□□ 0.01
StrcQ8VIM6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
StrcQ8VIM6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
StrcQ8VIM6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.11■□□□□ 0.01
StrcQ8VIM6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Gm26286-201ENSMUST00000104166 134 ntBASIC15.11■□□□□ 0.01
StrcQ8VIM6 Gm9022-201ENSMUST00000182482 992 ntBASIC15.11■□□□□ 0.01
StrcQ8VIM6 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
StrcQ8VIM6 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.11■□□□□ 0.01
StrcQ8VIM6 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
StrcQ8VIM6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
StrcQ8VIM6 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.1■□□□□ 0.01
StrcQ8VIM6 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Gm7395-201ENSMUST00000216059 1045 ntBASIC15.1■□□□□ 0.01
StrcQ8VIM6 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
StrcQ8VIM6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
StrcQ8VIM6 Gm22711-201ENSMUST00000116890 133 ntBASIC15.1■□□□□ 0.01
StrcQ8VIM6 Gm13668-201ENSMUST00000119237 1001 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms