Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Gm13350-201ENSMUST00000120519 479 ntBASIC13.92□□□□□ -0.18
TraipQ8VIG6 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Gm37259-201ENSMUST00000193903 849 ntBASIC13.92□□□□□ -0.18
TraipQ8VIG6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.92□□□□□ -0.18
TraipQ8VIG6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TraipQ8VIG6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.91□□□□□ -0.18
TraipQ8VIG6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
TraipQ8VIG6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Gm24255-201ENSMUST00000104481 128 ntBASIC13.91□□□□□ -0.18
TraipQ8VIG6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Gm15370-201ENSMUST00000117158 253 ntBASIC13.91□□□□□ -0.18
TraipQ8VIG6 Gm14704-201ENSMUST00000120300 874 ntBASIC13.91□□□□□ -0.18
TraipQ8VIG6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Gm10608-202ENSMUST00000213924 676 ntBASIC13.91□□□□□ -0.18
TraipQ8VIG6 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.91□□□□□ -0.18
TraipQ8VIG6 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.91□□□□□ -0.18
TraipQ8VIG6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.91□□□□□ -0.18
TraipQ8VIG6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TraipQ8VIG6 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms