Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa1Q8VEE4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Mir1897-201ENSMUST00000122581 272 ntBASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa1Q8VEE4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Mir6990-201ENSMUST00000183724 91 ntBASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Chchd1-203ENSMUST00000224633 557 ntBASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa1Q8VEE4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms