Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Q8VDP2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.73□□□□□ -0.37
Q8VDP2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Q8VDP2 Gm2756-201ENSMUST00000195851 400 ntBASIC12.73□□□□□ -0.37
Q8VDP2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Gm19164-201ENSMUST00000210667 640 ntBASIC12.73□□□□□ -0.37
Q8VDP2 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.73□□□□□ -0.37
Q8VDP2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.73□□□□□ -0.37
Q8VDP2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.73□□□□□ -0.37
Q8VDP2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Q8VDP2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.73□□□□□ -0.37
Q8VDP2 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q8VDP2 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.73□□□□□ -0.37
Q8VDP2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.73□□□□□ -0.37
Q8VDP2 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Q8VDP2 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Q8VDP2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
Q8VDP2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Q8VDP2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Q8VDP2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Q8VDP2 Gm9727-201ENSMUST00000161387 555 ntBASIC12.72□□□□□ -0.37
Q8VDP2 Gm6736-201ENSMUST00000166583 948 ntBASIC12.72□□□□□ -0.37
Q8VDP2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.72□□□□□ -0.37
Q8VDP2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.72□□□□□ -0.37
Q8VDP2 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.72□□□□□ -0.37
Q8VDP2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Q8VDP2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.72□□□□□ -0.37
Q8VDP2 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.72□□□□□ -0.37
Q8VDP2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
Q8VDP2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Q8VDP2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Q8VDP2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.72□□□□□ -0.37
Q8VDP2 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Q8VDP2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Q8VDP2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Q8VDP2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Q8VDP2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.71□□□□□ -0.37
Q8VDP2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.71□□□□□ -0.37
Q8VDP2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Gm27628-201ENSMUST00000184911 107 ntBASIC12.71□□□□□ -0.37
Q8VDP2 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.71□□□□□ -0.37
Q8VDP2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.71□□□□□ -0.37
Q8VDP2 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.71□□□□□ -0.37
Q8VDP2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Q8VDP2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Q8VDP2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms