Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Gm6447-201ENSMUST00000118905 835 ntBASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Gm44855-201ENSMUST00000205725 362 ntBASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps39Q8R5L3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Gm12341-201ENSMUST00000119724 503 ntBASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps39Q8R5L3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Gm13689-201ENSMUST00000119360 685 ntBASIC13.09□□□□□ -0.31
Vps39Q8R5L3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Gm44397-201ENSMUST00000195950 113 ntBASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Vps39Q8R5L3 Gm6983-201ENSMUST00000214912 628 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms