Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 AW822252-206ENSMUST00000208904 237 ntBASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.07□□□□□ -0.32
Nudcd3Q8R1N4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm44344-201ENSMUST00000200287 129 ntBASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm5312-201ENSMUST00000203728 547 ntBASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nudcd3Q8R1N4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nudcd3Q8R1N4 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms