Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atf7Q8R0S1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Mir1894-201ENSMUST00000122802 81 ntBASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.41■□□□□ 0.06
Atf7Q8R0S1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Gm5356-201ENSMUST00000093326 615 ntBASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atf7Q8R0S1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Gm11803-201ENSMUST00000119966 444 ntBASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Gm12490-201ENSMUST00000120255 560 ntBASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Gm10012-201ENSMUST00000078252 192 ntBASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Atf7Q8R0S1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Gm13123-201ENSMUST00000122173 492 ntBASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Gm9002-201ENSMUST00000178437 499 ntBASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Gm27892-201ENSMUST00000185017 106 ntBASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Gm17794-201ENSMUST00000220252 955 ntBASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms