Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.38□□□□□ -0.27
CopaQ8CIE6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Gm42550-201ENSMUST00000201553 960 ntBASIC13.37□□□□□ -0.27
CopaQ8CIE6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.37□□□□□ -0.27
CopaQ8CIE6 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CopaQ8CIE6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
CopaQ8CIE6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.36□□□□□ -0.27
CopaQ8CIE6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Mir1938-201ENSMUST00000158746 100 ntBASIC13.36□□□□□ -0.27
CopaQ8CIE6 Gm24196-201ENSMUST00000179161 110 ntBASIC13.36□□□□□ -0.27
CopaQ8CIE6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.36□□□□□ -0.27
CopaQ8CIE6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.36□□□□□ -0.27
CopaQ8CIE6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.36□□□□□ -0.27
CopaQ8CIE6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
CopaQ8CIE6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Gm12957-201ENSMUST00000117835 377 ntBASIC13.35□□□□□ -0.27
CopaQ8CIE6 Gm14660-201ENSMUST00000119809 575 ntBASIC13.35□□□□□ -0.27
CopaQ8CIE6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Gm29127-201ENSMUST00000188304 517 ntBASIC13.35□□□□□ -0.27
CopaQ8CIE6 Gm45784-201ENSMUST00000188360 142 ntBASIC13.35□□□□□ -0.27
CopaQ8CIE6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CopaQ8CIE6 Gm18473-201ENSMUST00000220543 868 ntBASIC13.35□□□□□ -0.27
CopaQ8CIE6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms