Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rab43Q8CG50 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.74□□□□□ -0.37
Rab43Q8CG50 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.74□□□□□ -0.37
Rab43Q8CG50 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.74□□□□□ -0.37
Rab43Q8CG50 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.74□□□□□ -0.37
Rab43Q8CG50 Gm37466-201ENSMUST00000195692 652 ntBASIC12.74□□□□□ -0.37
Rab43Q8CG50 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.74□□□□□ -0.37
Rab43Q8CG50 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.74□□□□□ -0.37
Rab43Q8CG50 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rab43Q8CG50 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rab43Q8CG50 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.74□□□□□ -0.37
Rab43Q8CG50 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Gm12502-201ENSMUST00000120197 444 ntBASIC12.73□□□□□ -0.37
Rab43Q8CG50 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.73□□□□□ -0.37
Rab43Q8CG50 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab43Q8CG50 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab43Q8CG50 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab43Q8CG50 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab43Q8CG50 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab43Q8CG50 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab43Q8CG50 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab43Q8CG50 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms