Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 AC154262.2-202ENSMUST00000225158 1331 ntBASIC16.16■□□□□ 0.18
Smc5Q8CG46 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc5Q8CG46 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Gm5687-201ENSMUST00000118252 640 ntBASIC16.15■□□□□ 0.18
Smc5Q8CG46 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.15■□□□□ 0.18
Smc5Q8CG46 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Gm44124-201ENSMUST00000204159 472 ntBASIC16.15■□□□□ 0.18
Smc5Q8CG46 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc5Q8CG46 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Smc5Q8CG46 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Smc5Q8CG46 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.14■□□□□ 0.17
Smc5Q8CG46 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Smc5Q8CG46 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.14■□□□□ 0.17
Smc5Q8CG46 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smc5Q8CG46 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.13■□□□□ 0.17
Smc5Q8CG46 AC169036.1-201ENSMUST00000227994 296 ntBASIC16.13■□□□□ 0.17
Smc5Q8CG46 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.13■□□□□ 0.17
Smc5Q8CG46 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smc5Q8CG46 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms