Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Gm15276-201ENSMUST00000145953 498 ntBASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Gm16570-201ENSMUST00000161951 436 ntBASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Rn7s1-201ENSMUST00000174924 300 ntBASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Rn7s2-201ENSMUST00000175032 300 ntBASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Gm26461-201ENSMUST00000175064 290 ntBASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Mir3102-201ENSMUST00000175555 104 ntBASIC16.04■□□□□ 0.16
Trim52Q8CDV4 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Gm8712-201ENSMUST00000221090 701 ntBASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Gm37201-201ENSMUST00000191845 523 ntBASIC16.03■□□□□ 0.16
Trim52Q8CDV4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trim52Q8CDV4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Gm14109-201ENSMUST00000118814 309 ntBASIC16.02■□□□□ 0.16
Trim52Q8CDV4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim52Q8CDV4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim52Q8CDV4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim52Q8CDV4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim52Q8CDV4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim52Q8CDV4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim52Q8CDV4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim52Q8CDV4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim52Q8CDV4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trim52Q8CDV4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim52Q8CDV4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim52Q8CDV4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim52Q8CDV4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim52Q8CDV4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim52Q8CDV4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
Trim52Q8CDV4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim52Q8CDV4 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.01■□□□□ 0.15
Trim52Q8CDV4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim52Q8CDV4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trim52Q8CDV4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim52Q8CDV4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms