Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vcpip1Q8CDG3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Gm8602-201ENSMUST00000184045 607 ntBASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Gm42550-201ENSMUST00000201553 960 ntBASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vcpip1Q8CDG3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Gm38223-201ENSMUST00000194484 695 ntBASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Gm9908-201ENSMUST00000211534 448 ntBASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vcpip1Q8CDG3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms