Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Gm19184-201ENSMUST00000196798 928 ntBASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Gm43118-201ENSMUST00000199149 775 ntBASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.12■□□□□ 0.01
Shisa4Q8CA71 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shisa4Q8CA71 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Gm13813-201ENSMUST00000120998 787 ntBASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Gm16296-201ENSMUST00000159905 325 ntBASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Gm38002-201ENSMUST00000193255 180 ntBASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Gm7783-201ENSMUST00000204795 781 ntBASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Gm45880-201ENSMUST00000213041 853 ntBASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shisa4Q8CA71 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Mir5132-201ENSMUST00000175166 71 ntBASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Gm37008-201ENSMUST00000195712 319 ntBASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Shisa4Q8CA71 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.09■□□□□ 0.01
Shisa4Q8CA71 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms