Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx1Q8C8B0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Gm18054-201ENSMUST00000207539 555 ntBASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.21■□□□□ 0.03
Alx1Q8C8B0 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alx1Q8C8B0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx1Q8C8B0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx1Q8C8B0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx1Q8C8B0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx1Q8C8B0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx1Q8C8B0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx1Q8C8B0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
Alx1Q8C8B0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Gm24548-201ENSMUST00000158650 108 ntBASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx1Q8C8B0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Gm16296-201ENSMUST00000159905 325 ntBASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx1Q8C8B0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms