Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpne1Q8C166 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cpne1Q8C166 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpne1Q8C166 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpne1Q8C166 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpne1Q8C166 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpne1Q8C166 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpne1Q8C166 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cpne1Q8C166 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cpne1Q8C166 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpne1Q8C166 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpne1Q8C166 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.23□□□□□ -0.45
Cpne1Q8C166 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.23□□□□□ -0.45
Cpne1Q8C166 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Gm8652-201ENSMUST00000181363 964 ntBASIC12.23□□□□□ -0.45
Cpne1Q8C166 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.23□□□□□ -0.45
Cpne1Q8C166 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.23□□□□□ -0.45
Cpne1Q8C166 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.23□□□□□ -0.45
Cpne1Q8C166 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cpne1Q8C166 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.22□□□□□ -0.45
Cpne1Q8C166 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.22□□□□□ -0.45
Cpne1Q8C166 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Mir7221-201ENSMUST00000184009 72 ntBASIC12.22□□□□□ -0.45
Cpne1Q8C166 Gm27839-201ENSMUST00000184242 106 ntBASIC12.22□□□□□ -0.45
Cpne1Q8C166 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.22□□□□□ -0.45
Cpne1Q8C166 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cpne1Q8C166 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms