Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp47Q8BY87 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Usp47Q8BY87 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Gm6992-201ENSMUST00000217973 1607 ntBASIC18.36■□□□□ 0.53
Usp47Q8BY87 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC18.36■□□□□ 0.53
Usp47Q8BY87 AC132384.14-201ENSMUST00000219346 1147 ntBASIC18.36■□□□□ 0.53
Usp47Q8BY87 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC18.36■□□□□ 0.53
Usp47Q8BY87 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC18.36■□□□□ 0.53
Usp47Q8BY87 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp47Q8BY87 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Daam2-202ENSMUST00000224595 1926 ntBASIC18.35■□□□□ 0.53
Usp47Q8BY87 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC18.35■□□□□ 0.53
Usp47Q8BY87 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Gm13813-201ENSMUST00000120998 787 ntBASIC18.35■□□□□ 0.53
Usp47Q8BY87 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Mospd4-201ENSMUST00000180618 576 ntBASIC18.35■□□□□ 0.53
Usp47Q8BY87 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Gm6652-201ENSMUST00000186414 1070 ntBASIC18.35■□□□□ 0.53
Usp47Q8BY87 Gm6621-201ENSMUST00000193251 772 ntBASIC18.35■□□□□ 0.53
Usp47Q8BY87 Gm43758-201ENSMUST00000199500 367 ntBASIC18.35■□□□□ 0.53
Usp47Q8BY87 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 AC151895.1-201ENSMUST00000219025 1742 ntBASIC18.35■□□□□ 0.53
Usp47Q8BY87 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Gm3287-205ENSMUST00000228893 1332 ntBASIC18.35■□□□□ 0.53
Usp47Q8BY87 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp47Q8BY87 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp47Q8BY87 CT025610.1-201ENSMUST00000224552 1786 ntBASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm45706-201ENSMUST00000213063 2136 ntBASIC18.34■□□□□ 0.53
Usp47Q8BY87 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm4986-201ENSMUST00000119731 549 ntBASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm13492-201ENSMUST00000119772 665 ntBASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm13297-201ENSMUST00000120205 934 ntBASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm11964-201ENSMUST00000120982 444 ntBASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm7895-201ENSMUST00000187459 1173 ntBASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Usp47Q8BY87 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm7172-201ENSMUST00000218047 1152 ntBASIC18.34■□□□□ 0.53
Usp47Q8BY87 AC165260.3-202ENSMUST00000224550 1031 ntBASIC18.34■□□□□ 0.53
Usp47Q8BY87 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Usp47Q8BY87 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp47Q8BY87 Gm45546-201ENSMUST00000211053 2394 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms