Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cdk5rap1Q8BTW8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.44□□□□□ -0.42
Cdk5rap1Q8BTW8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap1Q8BTW8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdk5rap1Q8BTW8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap1Q8BTW8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Cdk5rap1Q8BTW8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap1Q8BTW8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdk5rap1Q8BTW8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm37042-201ENSMUST00000193816 581 ntBASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm42627-201ENSMUST00000197347 224 ntBASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm43133-201ENSMUST00000197472 463 ntBASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap1Q8BTW8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm15198-201ENSMUST00000117283 177 ntBASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Gm9823-201ENSMUST00000051212 327 ntBASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap1Q8BTW8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms