Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Gm12957-201ENSMUST00000117835 377 ntBASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Gm18041-201ENSMUST00000218210 618 ntBASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup54Q8BTS4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.36□□□□□ -0.27
Nup54Q8BTS4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup54Q8BTS4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Gm5187-201ENSMUST00000117317 991 ntBASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Gm12742-201ENSMUST00000117326 410 ntBASIC13.35□□□□□ -0.27
Nup54Q8BTS4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nup54Q8BTS4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms