Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm8741-201ENSMUST00000174736 384 ntBASIC10.77□□□□□ -0.69
Smg1Q8BKX6 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Gm12990-201ENSMUST00000120372 468 ntBASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Gm6963-201ENSMUST00000147879 379 ntBASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.77□□□□□ -0.69
Smg1Q8BKX6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC10.76□□□□□ -0.69
Smg1Q8BKX6 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Gm15036-201ENSMUST00000118880 400 ntBASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Gm15573-201ENSMUST00000119487 540 ntBASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Gm3619-201ENSMUST00000219947 775 ntBASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Gm42657-201ENSMUST00000201746 211 ntBASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Gm2517-201ENSMUST00000215651 348 ntBASIC10.76□□□□□ -0.69
Smg1Q8BKX6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.75□□□□□ -0.69
Smg1Q8BKX6 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Gm19187-201ENSMUST00000206781 892 ntBASIC10.75□□□□□ -0.69
Smg1Q8BKX6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Gm14704-201ENSMUST00000120300 874 ntBASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Gm14585-201ENSMUST00000120713 634 ntBASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Gm13022-201ENSMUST00000121181 285 ntBASIC10.75□□□□□ -0.69
Smg1Q8BKX6 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms