Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynbQ8BI41 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
SynbQ8BI41 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynbQ8BI41 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SynbQ8BI41 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynbQ8BI41 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynbQ8BI41 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynbQ8BI41 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynbQ8BI41 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynbQ8BI41 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynbQ8BI41 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynbQ8BI41 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynbQ8BI41 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynbQ8BI41 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SynbQ8BI41 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SynbQ8BI41 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynbQ8BI41 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.52□□□□□ -0.41
SynbQ8BI41 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.52□□□□□ -0.41
SynbQ8BI41 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SynbQ8BI41 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.52□□□□□ -0.41
SynbQ8BI41 Gm14723-201ENSMUST00000118686 215 ntBASIC12.52□□□□□ -0.41
SynbQ8BI41 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Gm4271-201ENSMUST00000174444 973 ntBASIC12.52□□□□□ -0.41
SynbQ8BI41 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.52□□□□□ -0.41
SynbQ8BI41 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.52□□□□□ -0.41
SynbQ8BI41 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.52□□□□□ -0.41
SynbQ8BI41 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.52□□□□□ -0.41
SynbQ8BI41 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.52□□□□□ -0.41
SynbQ8BI41 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SynbQ8BI41 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.52□□□□□ -0.41
SynbQ8BI41 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynbQ8BI41 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Gm12203-201ENSMUST00000118235 598 ntBASIC12.51□□□□□ -0.41
SynbQ8BI41 Gm12209-201ENSMUST00000120089 596 ntBASIC12.51□□□□□ -0.41
SynbQ8BI41 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Gm38002-201ENSMUST00000193255 180 ntBASIC12.51□□□□□ -0.41
SynbQ8BI41 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Gm38266-201ENSMUST00000194931 421 ntBASIC12.51□□□□□ -0.41
SynbQ8BI41 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.51□□□□□ -0.41
SynbQ8BI41 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SynbQ8BI41 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynbQ8BI41 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms