Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.65□□□□□ -0.38
Rnf38Q8BI21 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rnf38Q8BI21 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.39
Rnf38Q8BI21 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rnf38Q8BI21 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rnf38Q8BI21 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.65□□□□□ -0.39
Rnf38Q8BI21 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rnf38Q8BI21 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Syt7-204ENSMUST00000223586 1344 ntBASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.64□□□□□ -0.39
Rnf38Q8BI21 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Gm24694-201ENSMUST00000180054 110 ntBASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Gm27663-201ENSMUST00000184839 110 ntBASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Gm5279-201ENSMUST00000199575 745 ntBASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Gm19078-201ENSMUST00000206311 727 ntBASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf38Q8BI21 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf38Q8BI21 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms