Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Atg4bQ8BGE6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Gm11618-201ENSMUST00000117946 267 ntBASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Gm11814-201ENSMUST00000119515 929 ntBASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atg4bQ8BGE6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Gm24196-201ENSMUST00000179161 110 ntBASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Gm27486-201ENSMUST00000184923 80 ntBASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atg4bQ8BGE6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atg4bQ8BGE6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atg4bQ8BGE6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atg4bQ8BGE6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms